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  5. PSME_00022622-RA

PSME_00022622-RA


Description : (q41638|xtha_phaan : 479.0) Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (at5g13870 : 473.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 946.0) & (original description: no original description)


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022622-RA

Target Alias Description ECC score Gene Family Method Actions
422922 No alias xyloglucan endotransglucosylase/hydrolase 5 0.02 Orthogroups_2024-Update
A4A49_04196 No alias xyloglucan endotransglucosylasehydrolase protein 9 0.04 Orthogroups_2024-Update
A4A49_15625 No alias xyloglucan endotransglucosylasehydrolase 1 0.02 Orthogroups_2024-Update
A4A49_21659 No alias xyloglucan endotransglucosylasehydrolase protein 22 0.04 Orthogroups_2024-Update
At4g28850 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 Orthogroups_2024-Update
Glyma.09G062600 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
MA_11511g0010 No alias (at2g36870 : 354.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_146337g0020 No alias (at5g13870 : 266.0) EXGT-A4, endoxyloglucan... 0.04 Orthogroups_2024-Update
MA_20669g0010 No alias (at2g36870 : 290.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_328340g0010 No alias (at4g03210 : 285.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
Mp2g17810.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
Mp2g18360.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
PSME_00001208-RA No alias (at4g03210 : 319.0) encodes a member of xyloglucan... 0.05 Orthogroups_2024-Update
PSME_00001209-RA No alias (at4g03210 : 309.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00019699-RA No alias (q39857|xth_soybn : 456.0) Probable xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00023359-RA No alias (at5g13870 : 301.0) EXGT-A4, endoxyloglucan... 0.04 Orthogroups_2024-Update
PSME_00037525-RA No alias (p35694|bru1_soybn : 350.0) Brassinosteroid-regulated... 0.04 Orthogroups_2024-Update
PSME_00039728-RA No alias (q39857|xth_soybn : 318.0) Probable xyloglucan... 0.05 Orthogroups_2024-Update
PSME_00040364-RA No alias (at4g03210 : 145.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00045889-RA No alias (p35694|bru1_soybn : 350.0) Brassinosteroid-regulated... 0.05 Orthogroups_2024-Update
PSME_00047162-RA No alias (at4g03210 : 301.0) encodes a member of xyloglucan... 0.05 Orthogroups_2024-Update
PSME_00047378-RA No alias (at4g25810 : 342.0) xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00047671-RA No alias (at4g37800 : 399.0) xyloglucan... 0.04 Orthogroups_2024-Update
Seita.8G142000.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Sobic.010G246400.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Sobic.010G246700.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Sopen11g026010 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
BP GO:0006073 cellular glucan metabolic process IEA InterProScan predictions
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA InterProScan predictions
CC GO:0048046 apoplast IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010713 XET_C 239 284
IPR000757 GH16 30 210
No external refs found!