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  5. PSME_00022628-RA

PSME_00022628-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022628-RA
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G038600 No alias TIFY domain/Divergent CCT motif family protein 0.03 Orthogroups_2024-Update
Glyma.17G047700 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
MA_10427283g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Mp6g06230.1 No alias transcription factor (TIFY) 0.02 Orthogroups_2024-Update
PSME_00007327-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00028575-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.2G388400.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.02 Orthogroups_2024-Update
Seita.9G517900.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G518000.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018467 CCT_CS 237 258
IPR010399 Tify_dom 159 188
No external refs found!