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  5. PSME_00022643-RA

PSME_00022643-RA


Description : (at3g53480 : 320.0) Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells.; pleiotropic drug resistance 9 (PDR9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: cellular response to indolebutyric acid stimulus, drug transmembrane transport, root development, auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 5 (TAIR:AT2G37280.1); Has 430532 Blast hits to 296745 proteins in 4078 species: Archae - 8262; Bacteria - 349677; Metazoa - 9969; Fungi - 7006; Plants - 6279; Viruses - 7; Other Eukaryotes - 49332 (source: NCBI BLink). & (q8gu88|pdr7_orysa : 318.0) Putative pleiotropic drug resistance protein 7 - Oryza sativa (Rice) & (reliability: 640.0) & (original description: no original description)


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022643-RA

Target Alias Description ECC score Gene Family Method Actions
426337 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
A4A49_00289 No alias abc transporter g family member 32 0.01 Orthogroups_2024-Update
A4A49_20840 No alias abc transporter g family member 36 0.01 Orthogroups_2024-Update
At2g26910 No alias PEC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNA5] 0.02 Orthogroups_2024-Update
Brara.E00778.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Glyma.14G127800 No alias pleiotropic drug resistance 12 0.01 Orthogroups_2024-Update
LOC_Os02g11760 No alias pleiotropic drug resistance protein, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 18 170
No external refs found!