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  5. PSME_00022715-RA

PSME_00022715-RA


Description : (at3g53960 : 493.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G37900.1); Has 6025 Blast hits to 5886 proteins in 1158 species: Archae - 0; Bacteria - 2442; Metazoa - 501; Fungi - 426; Plants - 2213; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 958.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022715-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_08589 No alias protein nrt1 ptr family 5.2 0.03 Orthogroups_2024-Update
Bradi1g72910 No alias peptide transporter 2 0.04 Orthogroups_2024-Update
Bradi3g28400 No alias peptide transporter 3 0.02 Orthogroups_2024-Update
Bradi3g33040 No alias nitrate transporter 1.1 0.03 Orthogroups_2024-Update
Brara.I03305.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Glyma.13G197500 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G106160.2 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
MA_10427079g0030 No alias (at2g02040 : 751.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
Mp3g03480.1 No alias anion transporter (NRT1/PTR) 0.03 Orthogroups_2024-Update
Mp8g15680.1 No alias anion transporter (NRT1/PTR) 0.03 Orthogroups_2024-Update
PSME_00019452-RA No alias (at5g46040 : 570.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
PSME_00021437-RA No alias (at3g54140 : 699.0) Encodes a di- and tri-peptide... 0.03 Orthogroups_2024-Update
PSME_00046943-RA No alias (at1g32450 : 678.0) Transmembrane nitrate transporter.... 0.06 Orthogroups_2024-Update
PSME_00048049-RA No alias (at2g02040 : 526.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
Potri.001G013400 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G106900 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Pp1s143_133V6 No alias F7J8.160; oligopeptide transporter - like protein... 0.02 Orthogroups_2024-Update
Sobic.003G076200.2 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 149 571
No external refs found!