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  5. PSME_00022722-RA

PSME_00022722-RA


Description : (p0c132|iaa30_orysa : 233.0) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) - Oryza sativa (Rice) & (at5g65670 : 218.0) auxin (indole-3-acetic acid) induced gene; indole-3-acetic acid inducible 9 (IAA9); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2120 Blast hits to 2118 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 3; Plants - 2115; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 436.0) & (original description: no original description)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022722-RA
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
A4A49_02602 No alias auxin-responsive protein iaa14 0.03 Orthogroups_2024-Update
A4A49_33164 No alias auxin-responsive protein iaa16 0.02 Orthogroups_2024-Update
Bradi1g55370 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Bradi4g02580 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
MA_10430843g0020 No alias (p0c132|iaa30_orysa : 207.0) Auxin-responsive protein... 0.03 Orthogroups_2024-Update
Potri.003G048100 No alias phytochrome-associated protein 1 0.03 Orthogroups_2024-Update
Potri.008G172400 No alias auxin-induced protein 13 0.03 Orthogroups_2024-Update
Seita.3G173700.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Seita.4G226200.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Seita.9G054500.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Solyc06g053830 No alias auxin-regulated IAA7 0.04 Orthogroups_2024-Update
Solyc09g065850 No alias auxin-regulated IAA3 0.02 Orthogroups_2024-Update
Sopen03g039270 No alias AUX/IAA family 0.02 Orthogroups_2024-Update
Sopen06g003360 No alias AUX/IAA family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 15 286
No external refs found!