1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen05g032050

Sopen05g032050


Description : Retinal pigment epithelial membrane protein


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g032050
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
A4A49_35209 No alias 9-cis-epoxycarotenoid dioxygenase nced6, chloroplastic 0.02 Orthogroups_2024-Update
At3g63520 No alias Carotenoid 9,10(9',10')-cleavage dioxygenase 1... 0.03 Orthogroups_2024-Update
At4g19170 No alias Probable carotenoid cleavage dioxygenase 4,... 0.03 Orthogroups_2024-Update
Brara.K00450.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
PSME_00053495-RA No alias (at3g14440 : 677.0) Encodes ... 0.03 Orthogroups_2024-Update
Potri.001G265600 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
Seita.3G391000.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 103 417
No external refs found!