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  5. Sopen05g032100

Sopen05g032100


Description : ABC-2 type transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g032100
Cluster HCCA clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
115821 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.04 Orthogroups_2024-Update
412710 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
417266 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
426328 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
At2g37280 No alias pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280] 0.03 Orthogroups_2024-Update
At3g53480 No alias ABC transporter G family member 37... 0.03 Orthogroups_2024-Update
Bradi4g28270 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Brara.F01034.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
GRMZM2G014282 No alias pleiotropic drug resistance 9 0.02 Orthogroups_2024-Update
GRMZM2G421495 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g42380 No alias pleiotropic drug resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g16290 No alias ABC-2 type transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g13720 No alias Plant PDR ABC transporter associated domain containing... 0.02 Orthogroups_2024-Update
LOC_Os12g32820 No alias pleiotropic drug resistance protein 3, putative, expressed 0.03 Orthogroups_2024-Update
MA_10425791g0020 No alias (q8gu88|pdr7_orysa : 1086.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
MA_17319g0020 No alias (q76cu2|pdr1_tobac : 630.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
MA_173274g0010 No alias (q5z9s8|pdr12_orysa : 429.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00000867-RA No alias (q8gu92|pdr2_orysa : 1758.0) Probable pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00012870-RA No alias (q76cu2|pdr1_tobac : 1718.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Potri.001G048900 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.7G048400.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G215300.2 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013581 PDR_assoc 783 842
IPR003439 ABC_transporter-like 230 412
IPR003439 ABC_transporter-like 905 1057
IPR029481 ABC_trans_N 142 205
IPR013525 ABC_2_trans 567 778
IPR013525 ABC_2_trans 1202 1416
No external refs found!