PSME_00022911-RA

Description : no hits & (original description: no original description)

Gene families : OG_42_0000720 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00022911-RA
Cluster	HCCA clusters: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
PSME_00000070-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00010353-RA	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update
PSME_00012313-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00012653-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00016903-RA	No alias	(at1g74930 : 114.0) encodes a member of the DREB...	0.01	Orthogroups_2024-Update
PSME_00040831-RA	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update
PSME_00048826-RA	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	InterProScan predictions
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006487	protein N-linked glycosylation	IEP	Predicted GO
BP	GO:0018196	peptidyl-asparagine modification	IEP	Predicted GO
BP	GO:0018279	protein N-linked glycosylation via asparagine	IEP	Predicted GO
BP	GO:0043631	RNA polyadenylation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR026960	RVT-Znf	130	197
IPR002156	RNaseH_domain	296	416

External Links

No external refs found!