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  5. Sopen05g032130

Sopen05g032130


Description : ABC-2 type transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g032130
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
412710 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
At1g15520 No alias ABC transporter G family member 40... 0.02 Orthogroups_2024-Update
Cre02.g095151 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.01 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Glyma.13G355000 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Orthogroups_2024-Update
MA_173274g0010 No alias (q5z9s8|pdr12_orysa : 429.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
Mp8g13070.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00001268-RA No alias (at1g59870 : 1834.0) ATP binding cassette transporter.... 0.02 Orthogroups_2024-Update
PSME_00009192-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
Potri.015G006000 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Pp1s15_135V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc05g053610 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen05g032120 No alias ABC-2 type transporter 0.06 Orthogroups_2024-Update
Sopen11g003180 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013581 PDR_assoc 723 786
IPR013525 ABC_2_trans 1145 1359
IPR013525 ABC_2_trans 506 718
IPR003439 ABC_transporter-like 848 1000
IPR003439 ABC_transporter-like 170 352
IPR029481 ABC_trans_N 88 145
No external refs found!