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  5. PSME_00022969-RA

PSME_00022969-RA


Description : (at3g20820 : 120.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p93194|rpk1_iponi : 98.6) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 220.0) & (original description: no original description)


Gene families : OG_42_0002753 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002753_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022969-RA
Cluster HCCA clusters: Cluster_633

Target Alias Description ECC score Gene Family Method Actions
PSME_00035252-RA No alias (at3g28890 : 187.0) receptor like protein 43 (RLP43);... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 183 242
No external refs found!