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  5. PSME_00023172-RA

PSME_00023172-RA


Description : (at2g29525 : 119.0) Inositol phosphorylceramide synthase; Arabidopsis Inositol phosphorylceramide synthase 3 (AtIPCS3); FUNCTIONS IN: inositol phosphoceramide synthase activity; INVOLVED IN: sphingolipid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; BEST Arabidopsis thaliana protein match is: Arabidopsis Inositol phosphorylceramide synthase 1 (TAIR:AT3G54020.1). & (reliability: 238.0) & (original description: no original description)


Gene families : OG_42_0001880 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001880_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023172-RA

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G004949 No alias Arabidopsis Inositol phosphorylceramide synthase 1 0.03 Orthogroups_2024-Update
PSME_00014362-RA No alias (at2g29525 : 228.0) Inositol phosphorylceramide... 0.02 Orthogroups_2024-Update
PSME_00025288-RA No alias (at3g54020 : 228.0) Inositol phosphorylceramide... 0.02 Orthogroups_2024-Update
PSME_00048192-RA No alias (at2g29525 : 80.9) Inositol phosphorylceramide synthase;... 0.07 Orthogroups_2024-Update
Sobic.008G129000.1 No alias inositol phosphorylceramide synthase *(IPCS) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025749 Sphingomyelin_synth-like_dom 31 74
No external refs found!