1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00023197-RA

PSME_00023197-RA


Description : (at5g59720 : 225.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27880|hsp12_medsa : 219.0) 18.2 kDa class I heat shock protein - Medicago sativa (Alfalfa) & (reliability: 450.0) & (original description: no original description)


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023197-RA
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G200300 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
MA_10433227g0010 No alias (p27397|hsp12_dauca : 204.0) 18.0 kDa class I heat shock... 0.03 Orthogroups_2024-Update
MA_106449g0010 No alias (p19244|hsp41_pea : 149.0) 22.7 kDa class IV heat shock... 0.03 Orthogroups_2024-Update
PSME_00012475-RA No alias (p19243|hsp11_pea : 160.0) 18.1 kDa class I heat shock... 0.05 Orthogroups_2024-Update
PSME_00034048-RA No alias (p12810|hsp11_wheat : 142.0) 16.9 kDa class I heat shock... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 55 158
No external refs found!