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Description : (at1g43710 : 435.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (reliability: 870.0) & (original description: no original description)
Gene families : OG_42_0125177 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00023238-RA | |
Cluster | HCCA clusters: Cluster_143 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | None | Extended |
MF | GO:0003824 | catalytic activity | None | Extended |
MF | GO:0005488 | binding | None | Extended |
BP | GO:0006082 | organic acid metabolic process | None | Extended |
MF | GO:0008144 | drug binding | None | Extended |
BP | GO:0008150 | biological_process | None | Extended |
BP | GO:0008152 | metabolic process | None | Extended |
BP | GO:0009987 | cellular process | None | Extended |
MF | GO:0016829 | lyase activity | None | Extended |
MF | GO:0016830 | carbon-carbon lyase activity | None | Extended |
MF | GO:0016831 | carboxy-lyase activity | IEA | InterProScan predictions |
BP | GO:0019752 | carboxylic acid metabolic process | IEA | InterProScan predictions |
MF | GO:0019842 | vitamin binding | None | Extended |
MF | GO:0030170 | pyridoxal phosphate binding | IEA | InterProScan predictions |
MF | GO:0036094 | small molecule binding | None | Extended |
MF | GO:0043167 | ion binding | None | Extended |
MF | GO:0043168 | anion binding | None | Extended |
BP | GO:0043436 | oxoacid metabolic process | None | Extended |
BP | GO:0044237 | cellular metabolic process | None | Extended |
BP | GO:0044281 | small molecule metabolic process | None | Extended |
MF | GO:0048037 | cofactor binding | None | Extended |
MF | GO:0050662 | coenzyme binding | None | Extended |
MF | GO:0070279 | vitamin B6 binding | None | Extended |
BP | GO:0071704 | organic substance metabolic process | None | Extended |
MF | GO:0097159 | organic cyclic compound binding | None | Extended |
MF | GO:1901363 | heterocyclic compound binding | None | Extended |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0033897 | ribonuclease T2 activity | IEP | Predicted GO |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002129 | PyrdxlP-dep_de-COase | 250 | 413 |
No external refs found! |
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