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  5. PSME_00023437-RA

PSME_00023437-RA


Description : (at4g24050 : 287.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G64590.1); Has 59308 Blast hits to 59247 proteins in 3068 species: Archae - 448; Bacteria - 39701; Metazoa - 3820; Fungi - 3579; Plants - 1905; Viruses - 0; Other Eukaryotes - 9855 (source: NCBI BLink). & (reliability: 574.0) & (original description: no original description)


Gene families : OG_42_0000257 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000257_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023437-RA
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
228800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 Orthogroups_2024-Update
420931 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
421434 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
A4A49_05952 No alias short-chain dehydrogenase tic 32, chloroplastic 0.02 Orthogroups_2024-Update
At1g64590 No alias At1g64590/F1N19_15 [Source:UniProtKB/TrEMBL;Acc:Q9SGV6] 0.03 Orthogroups_2024-Update
Brara.D02282.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00692.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G128577 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G171900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G186300 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G040100 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G208800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G208961 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G179800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G026200 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G135200 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G086360.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G011180.12 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g05840 No alias oxidoreductase, short chain dehydrogenase/reductase... 0.02 Orthogroups_2024-Update
LOC_Os06g03830 No alias retinol dehydrogenase, putative, expressed 0.02 Orthogroups_2024-Update
MA_125991g0010 No alias (at4g23430 : 154.0) NAD(P)-binding Rossmann-fold... 0.06 Orthogroups_2024-Update
MA_24622g0010 No alias (at4g24050 : 341.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
MA_42233g0010 No alias (at4g24050 : 311.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
MA_84984g0010 No alias (at4g24050 : 327.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
PSME_00009154-RA No alias (at5g02540 : 431.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
PSME_00011878-RA No alias (at5g02540 : 428.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
PSME_00042292-RA No alias (at1g64590 : 200.0) NAD(P)-binding Rossmann-fold... 0.05 Orthogroups_2024-Update
Potri.012G143600 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Pp1s392_35V6 No alias retinol dehydrogenase 14 0.03 Orthogroups_2024-Update
Sobic.001G307400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g025390 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002347 SDR_fam 42 182
No external refs found!