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  5. PSME_00023500-RA

PSME_00023500-RA


Description : (at1g72770 : 255.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (reliability: 502.0) & (original description: no original description)


Gene families : OG_42_0000303 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023500-RA
Cluster HCCA clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
A4A49_17365 No alias putative protein phosphatase 2c 51 0.04 Orthogroups_2024-Update
A4A49_19184 No alias putative protein phosphatase 2c 78 0.02 Orthogroups_2024-Update
At5g51760 No alias Probable protein phosphatase 2C 75... 0.03 Orthogroups_2024-Update
Brara.A03410.1 No alias clade A phosphatase 0.02 Orthogroups_2024-Update
Brara.E01974.1 No alias clade A phosphatase 0.04 Orthogroups_2024-Update
Brara.E02938.1 No alias clade A phosphatase 0.02 Orthogroups_2024-Update
Brara.H02462.1 No alias regulatory phosphatase component *(ABI1/ABI2) of... 0.02 Orthogroups_2024-Update
Glyma.13G106800 No alias homology to ABI1 0.03 Orthogroups_2024-Update
HORVU4Hr1G060370.1 No alias clade A phosphatase 0.03 Orthogroups_2024-Update
PSME_00013374-RA No alias (at2g29380 : 261.0) highly ABA-induced PP2C gene 3... 0.04 Orthogroups_2024-Update
Seita.3G164700.1 No alias regulatory phosphatase component *(ABI1/ABI2) of... 0.04 Orthogroups_2024-Update
Seita.5G379400.1 No alias clade A phosphatase 0.03 Orthogroups_2024-Update
Sopen06g032810 No alias Protein phosphatase 2C 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 231 541
No external refs found!