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PSME_00023565-RA


Description : (at3g23330 : 201.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1); Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0; Bacteria - 10; Metazoa - 50; Fungi - 109; Plants - 37267; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (q76c99|rf1_orysa : 84.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 402.0) & (original description: no original description)


Gene families : OG_42_0004350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023565-RA
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Mp1g08430.1 No alias Pentatricopeptide repeat-containing protein At2g31400,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 216 246
IPR002885 Pentatricopeptide_repeat 84 126
IPR002885 Pentatricopeptide_repeat 148 196
IPR002885 Pentatricopeptide_repeat 58 79
No external refs found!