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  5. PSME_00023605-RA

PSME_00023605-RA


Description : (p20026|myb1_horvu : 272.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (at4g38620 : 263.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (reliability: 526.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023605-RA
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
39516 No alias myb domain protein 3 0.04 Orthogroups_2024-Update
84195 No alias myb domain protein 61 0.04 Orthogroups_2024-Update
A4A49_01393 No alias transcription factor myb30 0.04 Orthogroups_2024-Update
A4A49_11142 No alias transcription factor myb30 0.03 Orthogroups_2024-Update
A4A49_12677 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_24839 No alias transcription factor gamyb 0.02 Orthogroups_2024-Update
A4A49_28222 No alias transcription factor rax3 0.03 Orthogroups_2024-Update
A4A49_31893 No alias transcription factor myb36 0.04 Orthogroups_2024-Update
A4A49_34066 No alias transcription factor rax3 0.06 Orthogroups_2024-Update
At1g16490 No alias Transcription factor MYB58... 0.03 Orthogroups_2024-Update
At1g34670 No alias Transcription factor MYB93... 0.02 Orthogroups_2024-Update
At3g24310 No alias MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5] 0.04 Orthogroups_2024-Update
At3g46130 No alias myb domain protein 48 [Source:TAIR;Acc:AT3G46130] 0.03 Orthogroups_2024-Update
At3g62610 No alias Transcription factor MYB11... 0.03 Orthogroups_2024-Update
At5g59780 No alias Transcription factor MYB59... 0.02 Orthogroups_2024-Update
Bradi2g04252 No alias myb domain protein 50 0.02 Orthogroups_2024-Update
Bradi2g11676 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.06 Orthogroups_2024-Update
Bradi3g48886 No alias myb domain protein 79 0.02 Orthogroups_2024-Update
Bradi4g16290 No alias myb domain protein 60 0.04 Orthogroups_2024-Update
Bradi4g26180 No alias myb domain protein 60 0.05 Orthogroups_2024-Update
Bradi5g21970 No alias myb domain protein 50 0.02 Orthogroups_2024-Update
Brara.B00599.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.02 Orthogroups_2024-Update
Brara.C01426.1 No alias MYB class-R2R3 transcription factor 0.06 Orthogroups_2024-Update
Brara.C03242.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.D00115.1 No alias accessory protein (LMI2) of floral meristem identity control 0.04 Orthogroups_2024-Update
Brara.G00892.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03643.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.04 Orthogroups_2024-Update
Brara.I00102.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G000818 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
GRMZM2G017268 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
GRMZM2G047600 No alias myb domain protein 112 0.04 Orthogroups_2024-Update
GRMZM2G055158 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
GRMZM2G084799 No alias myb domain protein 12 0.04 Orthogroups_2024-Update
GRMZM2G123202 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
GRMZM2G126566 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
GRMZM2G160838 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G162434 No alias myb domain protein 60 0.04 Orthogroups_2024-Update
GRMZM2G162709 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
GRMZM2G171781 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
GRMZM2G172327 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Glyma.04G125700 No alias myb domain protein 33 0.03 Orthogroups_2024-Update
Glyma.06G300400 No alias myb domain protein 74 0.03 Orthogroups_2024-Update
Glyma.06G312900 No alias myb domain protein 65 0.03 Orthogroups_2024-Update
Glyma.07G228600 No alias myb domain protein 16 0.04 Orthogroups_2024-Update
Glyma.08G191500 No alias myb domain protein 26 0.04 Orthogroups_2024-Update
Glyma.10G006600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.10G059000 No alias myb domain protein 27 0.02 Orthogroups_2024-Update
Glyma.11G142900 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.11G194100 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Glyma.13G061900 No alias myb domain protein 16 0.06 Orthogroups_2024-Update
Glyma.13G066600 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G039200 No alias myb domain protein 120 0.05 Orthogroups_2024-Update
Glyma.14G214500 No alias myb domain protein 43 0.04 Orthogroups_2024-Update
Glyma.17G232220 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.19G038100 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.19G224600 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
HORVU0Hr1G001230.9 No alias MYB class-R2R3 subgroup-18 transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G027600.2 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G041300.2 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G081720.2 No alias transcriptional regulator *(MS188) & transcriptional... 0.03 Orthogroups_2024-Update
HORVU2Hr1G120340.2 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G088870.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G103970.5 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G058630.3 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g45090 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g50720 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g02370 No alias myb-like DNA-binding domain containing protein,... 0.04 Orthogroups_2024-Update
LOC_Os02g42870 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g04820 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g43580 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g15020 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g33070 No alias myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
MA_10432903g0010 No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_124887g0010 No alias (at4g38620 : 244.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_246142g0010 No alias (at4g38620 : 256.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_37058g0010 No alias (at5g35550 : 158.0) TT2 encodes a R2R3 MYB domain... 0.03 Orthogroups_2024-Update
MA_80033g0010 No alias (at5g65790 : 232.0) Encodes a putative MYB transcription... 0.06 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.06 Orthogroups_2024-Update
PSME_00021355-RA No alias "(at2g47460 : 196.0) ""MYB12 belongs to subgroup 7 of... 0.05 Orthogroups_2024-Update
PSME_00022392-RA No alias (at3g13540 : 238.0) Encodes a member of the MYB family... 0.04 Orthogroups_2024-Update
PSME_00040036-RA No alias (at5g55020 : 216.0) Encodes a putative transcription... 0.06 Orthogroups_2024-Update
Potri.001G086700 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Potri.003G094200 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
Potri.003G144200 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Potri.003G144300 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Potri.004G086300 No alias myb domain protein 43 0.04 Orthogroups_2024-Update
Potri.004G126700 No alias myb domain protein 96 0.02 Orthogroups_2024-Update
Potri.004G174400 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Potri.006G221200 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.006G221500 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Potri.009G018700 No alias myb domain protein 33 0.04 Orthogroups_2024-Update
Potri.010G174500 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Potri.012G055600 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Potri.013G056400 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.02 Orthogroups_2024-Update
Potri.017G075000 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G130300 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
Pp1s420_4V6 No alias myb-related transcription factor 0.02 Orthogroups_2024-Update
Seita.1G250600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Seita.1G281500.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.03 Orthogroups_2024-Update
Seita.2G400600.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Seita.3G161500.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
Seita.3G232500.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G337800.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.05 Orthogroups_2024-Update
Sobic.003G274000.1 No alias transcriptional regulator *(MYB26) & MYB class-R2R3... 0.02 Orthogroups_2024-Update
Sobic.004G011100.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Sobic.009G032000.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Solyc06g053610 No alias R2R3MYB transcription factor 14 0.03 Orthogroups_2024-Update
Solyc07g008010 No alias R2R3MYB transcription factor 82 0.04 Orthogroups_2024-Update
Solyc08g065910 No alias blind-like5 0.03 Orthogroups_2024-Update
Solyc11g072060 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PSR6_SALMI) 0.03 Orthogroups_2024-Update
Sopen01g031400 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g004090 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g023610 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 111
No external refs found!