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  5. PSME_00023609-RA

PSME_00023609-RA


Description : (at4g29900 : 458.0) one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.; autoinhibited Ca(2+)-ATPase 10 (ACA10); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: shoot development, inflorescence morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+ -ATPase, isoform 8 (TAIR:AT5G57110.2); Has 46568 Blast hits to 34154 proteins in 3167 species: Archae - 903; Bacteria - 32081; Metazoa - 4140; Fungi - 2685; Plants - 2119; Viruses - 3; Other Eukaryotes - 4637 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 330.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (reliability: 916.0) & (original description: no original description)


Gene families : OG_42_0000196 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023609-RA
Cluster HCCA clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Bradi2g60324 No alias autoinhibited Ca2+-ATPase 11 0.03 Orthogroups_2024-Update
Brara.A00753.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
Brara.D02534.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
Glyma.01G193600 No alias calcium ATPase 2 0.04 Orthogroups_2024-Update
HORVU1Hr1G067550.14 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
Potri.010G250800 No alias autoinhibited Ca(2+)-ATPase 9 0.03 Orthogroups_2024-Update
Sobic.005G028400.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.04 Orthogroups_2024-Update
Solyc02g064680 No alias Calcium-transporting ATPase (AHRD V3.3 *** M1BXI4_SOLTU) 0.02 Orthogroups_2024-Update
Sopen04g008370 No alias E1-E2 ATPase 0.03 Orthogroups_2024-Update
Sopen09g031720 No alias E1-E2 ATPase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006068 ATPase_P-typ_cation-transptr_C 331 367
No external refs found!