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  5. PSME_00023633-RA

PSME_00023633-RA


Description : (at2g33310 : 102.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5nb25|iaa3_orysa : 91.7) Auxin-responsive protein IAA3 (Indoleacetic acid-induced protein 3) - Oryza sativa (Rice) & (reliability: 204.0) & (original description: no original description)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023633-RA
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14230 No alias indole-3-acetic acid inducible 0.02 Orthogroups_2024-Update
GRMZM2G115357 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
GRMZM2G163848 No alias indoleacetic acid-induced protein 8 0.03 Orthogroups_2024-Update
MA_10430843g0010 No alias (at4g29080 : 97.8) phytochrome-associated protein 2... 0.05 Orthogroups_2024-Update
PSME_00041728-RA No alias (at2g33310 : 145.0) Auxin induced gene, IAA13 (IAA13).;... 0.05 Orthogroups_2024-Update
Sobic.003G291200.1 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 122 242
IPR033389 AUX/IAA_dom 243 288
No external refs found!