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  5. PSME_00023733-RA

PSME_00023733-RA


Description : (at1g22640 : 175.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p27898|mybp_maize : 168.0) Myb-related protein P - Zea mays (Maize) & (reliability: 318.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023733-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
39481 No alias myb domain protein 3 0.02 Orthogroups_2024-Update
A4A49_09862 No alias transcription factor myb36 0.02 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_31933 No alias transcription factor myb86 0.03 Orthogroups_2024-Update
At4g26930 No alias Transcription factor MYB97... 0.06 Orthogroups_2024-Update
At5g16770 No alias Myb domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KE69] 0.03 Orthogroups_2024-Update
Bradi1g07260 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Bradi2g17280 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Bradi3g36370 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
Bradi3g49190 No alias myb domain protein 15 0.06 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Brara.A03909.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
Brara.B02106.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C01184.1 No alias MYB class-R2R3 subgroup-14 transcription factor &... 0.02 Orthogroups_2024-Update
Brara.C01651.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.02 Orthogroups_2024-Update
Brara.C03242.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.C04156.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Brara.C04622.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.E02761.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.F01643.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.F03146.1 No alias transcriptional regulator *(TDF1) 0.07 Orthogroups_2024-Update
Brara.I00690.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Brara.I04780.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01347.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G160838 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G395672 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
GRMZM2G701063 No alias myb domain protein 111 0.04 Orthogroups_2024-Update
GRMZM5G833253 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.01G222200 No alias myb domain protein 103 0.04 Orthogroups_2024-Update
Glyma.02G005600 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Glyma.03G013300 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.03G225200 No alias myb domain protein 55 0.02 Orthogroups_2024-Update
Glyma.05G234600 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Glyma.06G103300 No alias myb domain protein 93 0.04 Orthogroups_2024-Update
Glyma.10G006600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.11G142900 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
Glyma.12G066000 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Glyma.12G104800 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.12G106400 No alias MYB-like 102 0.04 Orthogroups_2024-Update
Glyma.12G177700 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.13G187500 No alias myb domain protein 33 0.03 Orthogroups_2024-Update
Glyma.13G333200 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.14G069100 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.14G090900 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.15G041100 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
Glyma.15G259400 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Glyma.15G264000 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Glyma.16G063700 No alias myb domain protein 40 0.05 Orthogroups_2024-Update
Glyma.16G073000 No alias myb domain protein 21 0.03 Orthogroups_2024-Update
Glyma.19G061600 No alias myb domain protein 24 0.03 Orthogroups_2024-Update
Glyma.19G164600 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Glyma.19G222200 No alias myb domain protein 55 0.02 Orthogroups_2024-Update
Glyma.19G257400 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.20G158100 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
HORVU1Hr1G051980.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G072450.2 No alias MYB class-R2R3 transcription factor & MYB class-R2R3... 0.03 Orthogroups_2024-Update
LOC_Os01g50720 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g40530 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g42870 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g18480 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g26130 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g56090 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g10350 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g46560 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g26170 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g33810 No alias myb-related protein Myb4, putative, expressed 0.03 Orthogroups_2024-Update
MA_10430220g0010 No alias (at3g23250 : 216.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
MA_139238g0010 No alias (at1g09540 : 266.0) Encodes putative transcription... 0.03 Orthogroups_2024-Update
MA_139924g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_14061g0010 No alias (at5g57620 : 229.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_14452g0010 No alias (p20026|myb1_horvu : 199.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
MA_33964g0010 No alias (at5g16600 : 262.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_37058g0010 No alias (at5g35550 : 158.0) TT2 encodes a R2R3 MYB domain... 0.03 Orthogroups_2024-Update
MA_6393g0010 No alias (at5g57620 : 235.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_93127g0010 No alias (at4g38620 : 220.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_94467g0010 No alias (at3g13540 : 228.0) Encodes a member of the MYB family... 0.06 Orthogroups_2024-Update
PSME_00001482-RA No alias (at4g22680 : 248.0) Encodes a putative transcription... 0.07 Orthogroups_2024-Update
PSME_00005364-RA No alias (at1g22640 : 189.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00010370-RA No alias (at5g62470 : 192.0) Encodes a R2R3 type Myb... 0.04 Orthogroups_2024-Update
PSME_00010957-RA No alias (at3g61250 : 269.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00017439-RA No alias (at3g13540 : 222.0) Encodes a member of the MYB family... 0.04 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00031159-RA No alias (at4g38620 : 228.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00041772-RA No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00041970-RA No alias (at1g22640 : 188.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.04 Orthogroups_2024-Update
PSME_00052622-RA No alias (at3g02940 : 204.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00053285-RA No alias (at4g38620 : 263.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
Potri.001G036000 No alias myb domain protein 65 0.03 Orthogroups_2024-Update
Potri.001G224500 No alias myb domain protein 65 0.03 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Potri.009G018700 No alias myb domain protein 33 0.03 Orthogroups_2024-Update
Potri.010G114000 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.012G140500 No alias myb domain protein 19 0.03 Orthogroups_2024-Update
Potri.013G109300 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Pp1s2_55V6 No alias myb transcription factor 0.02 Orthogroups_2024-Update
Seita.3G051800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Seita.3G402900.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Seita.5G286200.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.05 Orthogroups_2024-Update
Seita.7G167300.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Seita.8G237700.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G222100.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.06 Orthogroups_2024-Update
Sobic.004G219800.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G148100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc06g053610 No alias R2R3MYB transcription factor 14 0.03 Orthogroups_2024-Update
Solyc06g069850 No alias R2R3MYB transcription factor 30 0.04 Orthogroups_2024-Update
Solyc10g005760 No alias R2R3MYB transcription factor 80 0.02 Orthogroups_2024-Update
Solyc11g073120 No alias R2R3MYB transcription factor 58 0.03 Orthogroups_2024-Update
Sopen03g035070 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen03g038240 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g027120 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen10g025190 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g005820 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 18 65
IPR001005 SANT/Myb 71 116
No external refs found!