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PSME_00023804-RA


Description : (at1g34040 : 211.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carbon-sulfur lyase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34060.1); Has 290 Blast hits to 290 proteins in 68 species: Archae - 8; Bacteria - 67; Metazoa - 0; Fungi - 6; Plants - 199; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description)


Gene families : OG_42_0003099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023804-RA
Cluster HCCA clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
Sobic.003G277800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
InterPro domains Description Start Stop
IPR006948 Alliinase_C 66 212
IPR006948 Alliinase_C 214 346
IPR006947 EGF_alliinase 11 64
No external refs found!