1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00023908-RA

PSME_00023908-RA


Description : (at5g19140 : 268.0) AILP1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to aluminum ion; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 840 Blast hits to 840 proteins in 265 species: Archae - 8; Bacteria - 375; Metazoa - 14; Fungi - 0; Plants - 326; Viruses - 3; Other Eukaryotes - 114 (source: NCBI BLink). & (p24805|tsjt1_tobac : 117.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 536.0) & (original description: no original description)


Gene families : OG_42_0000532 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023908-RA
Cluster HCCA clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
227818 No alias Aluminium induced protein with YGL and LRDR motifs 0.02 Orthogroups_2024-Update
A4A49_30744 No alias stem-specific protein tsjt1 0.04 Orthogroups_2024-Update
At4g27450 No alias AT4g27450/F27G19_50 [Source:UniProtKB/TrEMBL;Acc:Q93V62] 0.05 Orthogroups_2024-Update
Bradi5g26320 No alias Aluminium induced protein with YGL and LRDR motifs 0.02 Orthogroups_2024-Update
Brara.A01715.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F00154.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H01516.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.04G180700 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
Glyma.12G150500 No alias Aluminium induced protein with YGL and LRDR motifs 0.04 Orthogroups_2024-Update
Glyma.13G181000 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
Potri.004G040600 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
Pp1s126_130V6 No alias aluminum-induced protein 0.02 Orthogroups_2024-Update
Pp1s257_73V6 No alias F5N5.2; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.7G323100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G028600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G269200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G033200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g054370 No alias Stem-specific TSJT1 (AHRD V3.3 *** A0A0B0MRD0_GOSAR) 0.03 Orthogroups_2024-Update
Sopen01g031640 No alias Aluminium induced protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR024286 DUF3700 5 232
No external refs found!