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  5. PSME_00023953-RA

PSME_00023953-RA


Description : (at1g61720 : 82.8) Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; BANYULS (BAN); FUNCTIONS IN: oxidoreductase activity, anthocyanidin reductase activity; INVOLVED IN: negative regulation of flavonoid biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, seed development stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 9654 Blast hits to 9641 proteins in 1549 species: Archae - 92; Bacteria - 3374; Metazoa - 271; Fungi - 951; Plants - 2463; Viruses - 15; Other Eukaryotes - 2488 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description)


Gene families : OG_42_0001560 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001560_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00023953-RA
Cluster HCCA clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
GRMZM5G881887 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G256600 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os07g41060 No alias dihydroflavonol-4-reductase, putative, expressed 0.02 Orthogroups_2024-Update
MA_23704g0010 No alias (p51108|dfra_maize : 261.0) Dihydroflavonol-4-reductase... 0.03 Orthogroups_2024-Update
PSME_00007385-RA No alias (p51108|dfra_maize : 248.0) Dihydroflavonol-4-reductase... 0.04 Orthogroups_2024-Update
Seita.4G195600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G366200.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013120 Male_sterile_NAD-bd 21 149
No external refs found!