Description : (at4g02750 : 432.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 126.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 864.0) & (original description: no original description)
Gene families : OG_42_0011386 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011386_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00023978-RA | |
Cluster | HCCA clusters: Cluster_210 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
MA_10211068g0010 | No alias | (at4g02750 : 366.0) Tetratricopeptide repeat (TPR)-like... | 0.07 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 213 | 240 |
IPR002885 | Pentatricopeptide_repeat | 508 | 531 |
IPR002885 | Pentatricopeptide_repeat | 113 | 138 |
IPR002885 | Pentatricopeptide_repeat | 303 | 329 |
IPR002885 | Pentatricopeptide_repeat | 241 | 269 |
IPR002885 | Pentatricopeptide_repeat | 272 | 300 |
IPR002885 | Pentatricopeptide_repeat | 433 | 481 |
IPR002885 | Pentatricopeptide_repeat | 333 | 379 |
IPR002885 | Pentatricopeptide_repeat | 140 | 185 |
No external refs found! |