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  5. Sopen05g032880

Sopen05g032880


Description : GATA zinc finger


Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen05g032880
Cluster HCCA clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
A4A49_32464 No alias gata transcription factor 18 0.03 Orthogroups_2024-Update
At5g25830 No alias GATA transcription factor 12... 0.06 Orthogroups_2024-Update
Brara.D02723.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Glyma.14G094800 No alias cytokinin-responsive gata factor 1 0.03 Orthogroups_2024-Update
Potri.004G211800 No alias GATA transcription factor 11 0.02 Orthogroups_2024-Update
Potri.007G024500 No alias GATA type zinc finger transcription factor family protein 0.02 Orthogroups_2024-Update
Sobic.004G301100.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Sobic.008G179800.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Solyc01g060490 No alias GATA transcription factor, putative (AHRD V3.3 *** B9RZK8_RICCO) 0.03 Orthogroups_2024-Update
Sopen01g026800 No alias GATA zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000679 Znf_GATA 32 66
No external refs found!