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  5. PSME_00024099-RA

PSME_00024099-RA


Description : (at5g62280 : 89.0) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT2G45360.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.0) & (original description: no original description)


Gene families : OG_42_0000902 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000902_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00024099-RA
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
A4A49_42452 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.D02736.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I05120.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.07G055700 No alias Protein of unknown function (DUF1442) 0.03 Orthogroups_2024-Update
PSME_00005822-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Sopen08g027850 No alias Protein of unknown function (DUF1442) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR009902 DUF1442 3 194
No external refs found!