PSME_00024204-RA

Description : (at1g67720 : 441.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (q8lkz1|nork_pea : 380.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 842.0) & (original description: no original description)

Gene families : OG_42_0000556 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00024204-RA
Cluster	HCCA clusters: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
MA_10427090g0010	No alias	(at1g51860 : 93.2) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_10430556g0020	No alias	(at5g48740 : 461.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_1043102g0010	No alias	(at1g67720 : 244.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_10434259g0010	No alias	(at1g67720 : 232.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_10434857g0010	No alias	(at5g48740 : 293.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_12782g0010	No alias	(at1g51910 : 86.7) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_12782g0020	No alias	(at2g37050 : 393.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_48348g0010	No alias	(at1g51850 : 413.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
Mp1g05090.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.02	Orthogroups_2024-Update
Mp1g07220.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.02	Orthogroups_2024-Update
PSME_00002850-RA	No alias	(at2g37050 : 424.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00004108-RA	No alias	(at5g48740 : 473.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00004111-RA	No alias	(at5g48740 : 309.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00004374-RA	No alias	(at2g37050 : 408.0) Leucine-rich repeat protein kinase...	0.07	Orthogroups_2024-Update
PSME_00004906-RA	No alias	(at2g37050 : 379.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00005012-RA	No alias	(at2g37050 : 459.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00008790-RA	No alias	(at1g67720 : 461.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00009723-RA	No alias	(at5g48740 : 483.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00009724-RA	No alias	(at1g51860 : 182.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00012036-RA	No alias	(at5g48740 : 109.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00013345-RA	No alias	(at2g37050 : 427.0) Leucine-rich repeat protein kinase...	0.06	Orthogroups_2024-Update
PSME_00013957-RA	No alias	(at2g37050 : 318.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00015669-RA	No alias	(at3g21340 : 439.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00015892-RA	No alias	(at2g14440 : 295.0) Leucine-rich repeat protein kinase...	0.07	Orthogroups_2024-Update
PSME_00017223-RA	No alias	(at5g48740 : 268.0) Leucine-rich repeat protein kinase...	0.07	Orthogroups_2024-Update
PSME_00024717-RA	No alias	(at1g49100 : 440.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00025237-RA	No alias	(at4g20450 : 213.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00025848-RA	No alias	(at2g28990 : 442.0) Leucine-rich repeat protein kinase...	0.07	Orthogroups_2024-Update
PSME_00028080-RA	No alias	(at5g59660 : 164.0) Leucine-rich repeat protein kinase...	0.06	Orthogroups_2024-Update
PSME_00028208-RA	No alias	(at1g67720 : 248.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
Pp1s13_83V6	No alias	T2N18.19; leucine-rich repeat family protein / protein...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004568	chitinase activity	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
MF	GO:0008061	chitin binding	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
BP	GO:0017144	drug metabolic process	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	525	798
IPR024788	Malectin-like_Carb-bd_dom	3	279

External Links

No external refs found!

PSME_00024204-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation