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  5. Sopen05g032990

Sopen05g032990


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g032990
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
A4A49_35213 No alias dof zinc finger protein dof1.7 0.04 Orthogroups_2024-Update
A4A49_41416 No alias dof zinc finger protein dof1.4 0.03 Orthogroups_2024-Update
At3g61850 No alias Dof-type zinc finger DNA-binding family protein... 0.03 Orthogroups_2024-Update
Bradi2g10640 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Bradi3g51510 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Glyma.04G168300 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.15G022800 No alias DOF zinc finger protein 1 0.03 Orthogroups_2024-Update
PSME_00020524-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.02 Orthogroups_2024-Update
Seita.7G202300.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.9G452000.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 80 135
No external refs found!