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  5. PSME_00024358-RA

PSME_00024358-RA


Description : (at2g39420 : 390.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink). & (reliability: 736.0) & (original description: no original description)


Gene families : OG_42_0000201 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000201_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00024358-RA
Cluster HCCA clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
97826 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00580.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Pp1s336_21V6 No alias alpha beta fold family protein 0.02 Orthogroups_2024-Update
Seita.7G334900.1 No alias monoacylglycerol lipase 0.03 Orthogroups_2024-Update
evm.model.tig00000093.97 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
InterPro domains Description Start Stop
IPR022742 Hydrolase_4 35 273
IPR022742 Hydrolase_4 300 524
No external refs found!