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  5. Sopen05g033060

Sopen05g033060


Description : 60s Acidic ribosomal protein


Gene families : OG_42_0002448 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g033060
Cluster HCCA clusters: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
149765 No alias Ribosomal protein L10 family protein 0.03 Orthogroups_2024-Update
437282 No alias Ribosomal protein L10 family protein 0.06 Orthogroups_2024-Update
At3g09200 No alias 60S acidic ribosomal protein P0-2... 0.03 Orthogroups_2024-Update
Bradi3g14340 No alias Ribosomal protein L10 family protein 0.08 Orthogroups_2024-Update
Brara.A03571.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.C02046.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.C03284.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.E03102.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
GRMZM2G066460 No alias Ribosomal protein L10 family protein 0.04 Orthogroups_2024-Update
GRMZM2G179976 No alias Ribosomal protein L10 family protein 0.05 Orthogroups_2024-Update
Glyma.02G255500 No alias Ribosomal protein L10 family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G073720.5 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
MA_10433058g0020 No alias (p50346|rla0_soybn : 423.0) 60S acidic ribosomal protein... 0.04 Orthogroups_2024-Update
Potri.008G066200 No alias Ribosomal protein L10 family protein 0.04 Orthogroups_2024-Update
Seita.2G417900.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Seita.6G075100.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.007G029400.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Solyc05g054580 No alias 60S acidic ribosomal protein P0 (AHRD V3.3 *** K4C2D6_SOLLC) 0.06 Orthogroups_2024-Update
evm.model.contig_3715.5 No alias (o24573|rla0_maize : 264.0) 60S acidic ribosomal protein... 0.04 Orthogroups_2024-Update
evm.model.tig00000615.69 No alias (p41095|rla0_orysa : 288.0) 60S acidic ribosomal protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0042254 ribosome biogenesis IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 8 108
No external refs found!