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  5. Sopen05g033080

Sopen05g033080


Description : tRNA synthetases class I (M)


Gene families : OG_42_0006804 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g033080
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Bradi1g70570 No alias methionyl-tRNA synthetase / methionine--tRNA ligase /... 0.03 Orthogroups_2024-Update
Cre12.g487100 No alias methionyl-tRNA synthetase / methionine--tRNA ligase /... 0.03 Orthogroups_2024-Update
PSME_00038579-RA No alias (at3g55400 : 252.0) OVULE ABORTION 1 (OVA1); FUNCTIONS... 0.02 Orthogroups_2024-Update
Solyc05g054600 No alias Methionyl-tRNA synthetase family protein (AHRD V3.3 ***... 0.07 Orthogroups_2024-Update
evm.model.tig00020675.1 No alias (at3g55400 : 355.0) OVULE ABORTION 1 (OVA1); FUNCTIONS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002300 aa-tRNA-synth_Ia 78 203
IPR015413 Methionyl/Leucyl_tRNA_Synth 212 439
No external refs found!