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  5. PSME_00024392-RA

PSME_00024392-RA


Description : (at1g45130 : 134.0) beta-galactosidase 5 (BGAL5); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2206 Blast hits to 2062 proteins in 469 species: Archae - 15; Bacteria - 946; Metazoa - 364; Fungi - 218; Plants - 593; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (p48981|bgal_maldo : 120.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 268.0) & (original description: no original description)


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00024392-RA
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Bradi2g56607 No alias beta-galactosidase 10 0.05 Orthogroups_2024-Update
HORVU1Hr1G065290.7 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
HORVU3Hr1G050450.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
HORVU3Hr1G081960.9 No alias 1,2-beta-galactosidase & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Kfl00377_0060 kfl00377_0060_v1.... (p48981|bgal_maldo : 733.0) Beta-galactosidase precursor... 0.01 Orthogroups_2024-Update
PSME_00001344-RA No alias (p45582|bgal_aspof : 301.0) Beta-galactosidase precursor... 0.03 Orthogroups_2024-Update
Potri.002G080700 No alias beta-galactosidase 16 0.02 Orthogroups_2024-Update
Sobic.010G173800.1 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Sopen11g028000 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 273 345
No external refs found!