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  5. PSME_00024450-RA

PSME_00024450-RA


Description : (at1g68810 : 178.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 356.0) & (original description: no original description)


Gene families : OG_42_0000444 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000444_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00024450-RA
Cluster HCCA clusters: Cluster_72


Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 129 176
No external refs found!