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  5. PSME_00024545-RA

PSME_00024545-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00024545-RA
Cluster HCCA clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
439249 No alias TIFY domain/Divergent CCT motif family protein 0.03 Orthogroups_2024-Update
A4A49_10090 No alias protein tify 10a 0.05 Orthogroups_2024-Update
A4A49_42021 No alias protein tify 10a 0.06 Orthogroups_2024-Update
AC197764.4_FG003 No alias TIFY domain/Divergent CCT motif family protein 0.03 Orthogroups_2024-Update
At1g72450 No alias TIFY11B [Source:UniProtKB/TrEMBL;Acc:A0A178W2J3] 0.05 Orthogroups_2024-Update
Bradi1g39920 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi3g23220 No alias jasmonate-zim-domain protein 1 0.05 Orthogroups_2024-Update
Bradi4g31240 No alias jasmonate-zim-domain protein 1 0.05 Orthogroups_2024-Update
Brara.B02144.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.02 Orthogroups_2024-Update
Brara.F01223.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G03130.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.I04752.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G145458 No alias jasmonate-zim-domain protein 11 0.03 Orthogroups_2024-Update
GRMZM5G838098 No alias jasmonate-zim-domain protein 1 0.06 Orthogroups_2024-Update
Glyma.04G013800 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
Glyma.07G041400 No alias jasmonate-zim-domain protein 6 0.04 Orthogroups_2024-Update
Glyma.08G264701 No alias jasmonate-zim-domain protein 1 0.04 Orthogroups_2024-Update
Glyma.17G047700 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
HORVU7Hr1G041260.6 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g08310 No alias ZIM domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g08320 No alias ZIM domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g08330 No alias ZIM domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g25230 No alias ZIM domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426545g0010 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_10426545g0020 No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update
MA_10427283g0030 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_10436587g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_116760g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_137163g0010 No alias (at1g70700 : 84.0) JAZ9 is a protein presumed to be... 0.07 Orthogroups_2024-Update
MA_1854g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_469601g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_470613g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_8355655g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_843217g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00018972-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00030784-RA No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update
PSME_00032766-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00048468-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00049415-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.003G068900 No alias jasmonate-zim-domain protein 6 0.03 Orthogroups_2024-Update
Pp1s442_14V6 No alias MEB5.8; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s88_114V6 No alias MEB5.8; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.2G388400.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.07 Orthogroups_2024-Update
Seita.9G251600.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G252500.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.05 Orthogroups_2024-Update
Seita.9G371000.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.04 Orthogroups_2024-Update
Seita.9G517900.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G518100.1 No alias TIFY-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.001G482600.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G482700.1 No alias TIFY-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.002G374100.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update
Solyc07g042170 No alias Jasmonate-zim-domain protein (AHRD V3.3 *** A0A167V6B7_CAMSI) 0.04 Orthogroups_2024-Update
Solyc12g009220 No alias jasmonate ZIM-domain protein 1 0.07 Orthogroups_2024-Update
Sopen01g045960 No alias tify domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010399 Tify_dom 162 188
No external refs found!