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  5. PSME_00024561-RA

PSME_00024561-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00024561-RA
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
A4A49_10090 No alias protein tify 10a 0.04 Orthogroups_2024-Update
A4A49_42021 No alias protein tify 10a 0.03 Orthogroups_2024-Update
AC197764.4_FG003 No alias TIFY domain/Divergent CCT motif family protein 0.04 Orthogroups_2024-Update
At1g17380 No alias Protein TIFY 11A [Source:UniProtKB/Swiss-Prot;Acc:Q9LDU5] 0.04 Orthogroups_2024-Update
At1g72450 No alias TIFY11B [Source:UniProtKB/TrEMBL;Acc:A0A178W2J3] 0.03 Orthogroups_2024-Update
At1g74950 No alias TIFY10B [Source:UniProtKB/TrEMBL;Acc:A0A178WA69] 0.04 Orthogroups_2024-Update
Bradi1g21490 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
Bradi2g05850 No alias TIFY domain/Divergent CCT motif family protein 0.03 Orthogroups_2024-Update
Bradi3g10820 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
Bradi3g23220 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
Bradi4g31240 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
Brara.B02027.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F01223.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G03130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H02382.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update
Brara.I04752.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G145458 No alias jasmonate-zim-domain protein 11 0.03 Orthogroups_2024-Update
GRMZM5G838098 No alias jasmonate-zim-domain protein 1 0.04 Orthogroups_2024-Update
Glyma.01G204400 No alias TIFY domain/Divergent CCT motif family protein 0.04 Orthogroups_2024-Update
Glyma.08G264701 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
Glyma.16G010000 No alias jasmonate-zim-domain protein 6 0.03 Orthogroups_2024-Update
Glyma.17G047700 No alias jasmonate-zim-domain protein 1 0.05 Orthogroups_2024-Update
HORVU5Hr1G062290.6 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g08310 No alias ZIM domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g08330 No alias ZIM domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g28940 No alias ZIM domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g25230 No alias ZIM domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426545g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10426545g0020 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_10436587g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_116760g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_137163g0010 No alias (at1g70700 : 84.0) JAZ9 is a protein presumed to be... 0.07 Orthogroups_2024-Update
MA_1854g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_19887g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_469601g0010 No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update
MA_470613g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00002963-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00032766-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.001G166200 No alias jasmonate-zim-domain protein 5 0.03 Orthogroups_2024-Update
Pp1s88_114V6 No alias MEB5.8; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.2G388400.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update
Seita.9G251600.1 No alias TIFY-type transcription factor 0.04 Orthogroups_2024-Update
Seita.9G252300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G252500.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update
Seita.9G371000.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.04 Orthogroups_2024-Update
Seita.9G517900.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G518000.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G518100.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G259600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G259700.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G482600.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR018467 CCT_CS 248 274
IPR010399 Tify_dom 165 197
No external refs found!