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  5. PSME_00024563-RA

PSME_00024563-RA


Description : (at4g37080 : 199.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G42690.2). & (reliability: 398.0) & (original description: no original description)


Gene families : OG_42_0000727 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00024563-RA
Cluster HCCA clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
A4A49_14233 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi2g03160 No alias Protein of unknown function, DUF547 0.02 Orthogroups_2024-Update
Glyma.02G248232 No alias Protein of unknown function, DUF547 0.03 Orthogroups_2024-Update
Glyma.11G057600 No alias Protein of unknown function, DUF547 0.03 Orthogroups_2024-Update
PSME_00002783-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00004226-RA No alias (at5g42690 : 160.0) Protein of unknown function, DUF547;... 0.04 Orthogroups_2024-Update
PSME_00006146-RA No alias (at5g42690 : 117.0) Protein of unknown function, DUF547;... 0.01 Orthogroups_2024-Update
PSME_00012801-RA No alias (at5g42690 : 84.7) Protein of unknown function, DUF547;... 0.03 Orthogroups_2024-Update
PSME_00027940-RA No alias (at4g37080 : 127.0) Protein of unknown function, DUF547;... 0.04 Orthogroups_2024-Update
PSME_00032747-RA No alias (at4g37080 : 215.0) Protein of unknown function, DUF547;... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 4 74
IPR006869 DUF547 400 450
No external refs found!