1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00024840-RA

PSME_00024840-RA


Description : (at3g14090 : 395.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein D3 (EXO70D3); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D2 (TAIR:AT1G54090.1); Has 911 Blast hits to 902 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 98; Plants - 650; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 790.0) & (original description: no original description)


Gene families : OG_42_0000104 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00024840-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
At5g52350 No alias Exocyst subunit exo70 family protein A3... 0.03 Orthogroups_2024-Update
Brara.J01343.1 No alias component *(EXO70) of Exocyst complex 0.03 Orthogroups_2024-Update
GRMZM2G343437 No alias exocyst subunit exo70 family protein C1 0.03 Orthogroups_2024-Update
Glyma.13G134100 No alias exocyst subunit exo70 family protein H4 0.02 Orthogroups_2024-Update
Glyma.15G042400 No alias exocyst subunit exo70 family protein H7 0.03 Orthogroups_2024-Update
LOC_Os04g58870 No alias exo70 exocyst complex subunit, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g41820 No alias exo70 exocyst complex subunit domain containing protein,... 0.02 Orthogroups_2024-Update
MA_29736g0010 No alias (at3g14090 : 397.0) A member of EXO70 gene family,... 0.03 Orthogroups_2024-Update
Mp1g14780.1 No alias component EXO70 of Exocyst complex 0.03 Orthogroups_2024-Update
Mp5g19550.1 No alias component EXO70 of Exocyst complex 0.03 Orthogroups_2024-Update
Potri.001G325600 No alias exocyst subunit exo70 family protein C2 0.04 Orthogroups_2024-Update
Potri.013G152900 No alias exocyst subunit exo70 family protein B1 0.03 Orthogroups_2024-Update
Potri.017G093700 No alias exocyst subunit exo70 family protein E1 0.03 Orthogroups_2024-Update
Seita.1G167500.1 No alias component *(EXO70) of Exocyst complex 0.03 Orthogroups_2024-Update
Sobic.007G194400.1 No alias component *(EXO70) of Exocyst complex 0.02 Orthogroups_2024-Update
Solyc06g062990 No alias Exocyst subunit EXO70 family protein (AHRD V3.3 *** B9N7F2_POPTR) 0.03 Orthogroups_2024-Update
Solyc11g006620 No alias exocyst subunit exo70 family protein A1 (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEA InterProScan predictions
BP GO:0006887 exocytosis IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
InterPro domains Description Start Stop
IPR004140 Exo70 232 605
No external refs found!