PSME_00024943-RA

Description : (at1g67720 : 442.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (q8l4h4|nork_medtr : 379.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 868.0) & (original description: no original description)

Gene families : OG_42_0000556 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00024943-RA
Cluster	HCCA clusters: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
MA_10388485g0020	No alias	(at5g48740 : 255.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00004374-RA	No alias	(at2g37050 : 408.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00004905-RA	No alias	(at2g37050 : 401.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00004906-RA	No alias	(at2g37050 : 379.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00009374-RA	No alias	(at1g67720 : 427.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00009723-RA	No alias	(at5g48740 : 483.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00009724-RA	No alias	(at1g51860 : 182.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00013345-RA	No alias	(at2g37050 : 427.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00015892-RA	No alias	(at2g14440 : 295.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00021454-RA	No alias	(at5g48740 : 427.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00024717-RA	No alias	(at1g49100 : 440.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00025848-RA	No alias	(at2g28990 : 442.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00027961-RA	No alias	(at1g49100 : 349.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004506	squalene monooxygenase activity	IEP	Predicted GO
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0005319	lipid transporter activity	IEP	Predicted GO
BP	GO:0006869	lipid transport	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0061024	membrane organization	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
BP	GO:0120009	intermembrane lipid transfer	IEP	Predicted GO
MF	GO:0120013	intermembrane lipid transfer activity	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	608	880
IPR024788	Malectin-like_Carb-bd_dom	56	364

External Links

No external refs found!

PSME_00024943-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation