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  5. PSME_00024956-RA

PSME_00024956-RA


Description : (at5g25610 : 168.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 89.0) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 336.0) & (original description: no original description)


Gene families : OG_42_0000366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000366_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00024956-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_31256 No alias burp domain-containing protein 3 0.03 Orthogroups_2024-Update
Bradi2g49000 No alias BURP domain-containing protein 0.03 Orthogroups_2024-Update
Brara.B03626.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F02754.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00310.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I00536.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G069650.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G048820.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os11g06980 No alias BURP domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_183840g0010 No alias (at5g25610 : 205.0) responsive to dehydration 22 (RD22)... 0.04 Orthogroups_2024-Update
PSME_00008546-RA No alias (at5g25610 : 196.0) responsive to dehydration 22 (RD22)... 0.04 Orthogroups_2024-Update
PSME_00032573-RA No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
PSME_00040836-RA No alias (at5g25610 : 91.3) responsive to dehydration 22 (RD22)... 0.04 Orthogroups_2024-Update
PSME_00042678-RA No alias (at5g25610 : 225.0) responsive to dehydration 22 (RD22)... 0.04 Orthogroups_2024-Update
Potri.006G243600 No alias BURP domain-containing protein 0.03 Orthogroups_2024-Update
Potri.018G036700 No alias BURP domain-containing protein 0.03 Orthogroups_2024-Update
Pp1s81_232V6 No alias Dehydration-responsive protein RD22 precursor... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR004873 BURP_dom 102 302
No external refs found!