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  5. PSME_00025149-RA

PSME_00025149-RA


Description : (at1g69550 : 231.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (p93194|rpk1_iponi : 87.8) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 462.0) & (original description: no original description)


Gene families : OG_42_0000607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025149-RA
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
MA_10245438g0010 No alias (at1g69550 : 134.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10429550g0010 No alias (at1g69550 : 112.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_10430204g0020 No alias (at1g69550 : 133.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10433431g0020 No alias (at1g69550 : 123.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_138644g0010 No alias (at1g69550 : 129.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_8002527g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_89787g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_9403319g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00000640-RA No alias (at1g69550 : 142.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00012314-RA No alias (at1g69550 : 176.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00014666-RA No alias (at1g69550 : 257.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00016259-RA No alias (at1g69550 : 370.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00016728-RA No alias (at1g69550 : 234.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00019336-RA No alias (at1g69550 : 183.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00029570-RA No alias (at1g69550 : 193.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00031155-RA No alias (at1g69550 : 336.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00035348-RA No alias (at1g69550 : 133.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00035582-RA No alias (at1g69550 : 189.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00035584-RA No alias (at1g69550 : 191.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00038789-RA No alias (at1g69550 : 138.0) disease resistance protein... 0.07 Orthogroups_2024-Update
PSME_00043433-RA No alias (at1g69550 : 248.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00051667-RA No alias (at1g69550 : 197.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00052649-RA No alias (at1g69550 : 417.0) disease resistance protein... 0.07 Orthogroups_2024-Update
PSME_00052965-RA No alias (at1g69550 : 271.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00053001-RA No alias (at1g69550 : 147.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00054818-RA No alias (at1g69550 : 181.0) disease resistance protein... 0.07 Orthogroups_2024-Update
PSME_00055013-RA No alias (at1g69550 : 137.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00055796-RA No alias (at1g69550 : 228.0) disease resistance protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
CC GO:0031417 NatC complex IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR026906 LRR_5 706 811
IPR026906 LRR_5 567 678
IPR026906 LRR_5 1087 1195
IPR026906 LRR_5 947 1048
No external refs found!