PSME_00025162-RA

Description : (at2g34250 : 855.0) SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: response to salt stress, protein secretion; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT1G29310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1710.0) & (original description: no original description)

Gene families : OG_42_0002466 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002466_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00025162-RA
Cluster	HCCA clusters: Cluster_185

Target	Alias	Description	ECC score	Gene Family Method
At1g29310	No alias	SecY protein transport family protein...	0.03	Orthogroups_2024-Update
At2g34250	No alias	AT2G34250 protein [Source:UniProtKB/TrEMBL;Acc:O80774]	0.03	Orthogroups_2024-Update
Bradi1g70160	No alias	SecY protein transport family protein	0.02	Orthogroups_2024-Update
Brara.D02079.1	No alias	subunit alpha of co-translational insertion system Sec61...	0.04	Orthogroups_2024-Update
Brara.I02895.1	No alias	subunit alpha of co-translational insertion system Sec61...	0.02	Orthogroups_2024-Update
Seita.9G080700.1	No alias	subunit alpha of co-translational insertion system Sec61...	0.03	Orthogroups_2024-Update
Seita.9G492400.1	No alias	subunit alpha of co-translational insertion system Sec61...	0.03	Orthogroups_2024-Update
evm.model.contig_2400.1	No alias	(at1g78720 : 602.0) SecY protein transport family...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	IEA	InterProScan predictions
BP	GO:0015833	peptide transport	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Predicted GO
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
CC	GO:0005875	microtubule associated complex	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Predicted GO
BP	GO:0006732	coenzyme metabolic process	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0008536	Ran GTPase binding	IEP	Predicted GO
BP	GO:0009108	coenzyme biosynthetic process	IEP	Predicted GO
MF	GO:0009982	pseudouridine synthase activity	IEP	Predicted GO
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0015020	glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
CC	GO:0030286	dynein complex	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO
BP	GO:0051188	cofactor biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002208	SecY/SEC61-alpha	79	462
IPR019561	Translocon_Sec61/SecY_plug_dom	44	78

External Links

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PSME_00025162-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation