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  5. PSME_00025236-RA

PSME_00025236-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025236-RA
Cluster HCCA clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
At2g02300 No alias F-box protein PP2-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR1] 0.02 Orthogroups_2024-Update
At5g45090 No alias Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7... 0.03 Orthogroups_2024-Update
Brara.B03100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.07G222500 No alias phloem protein 2-A1 0.02 Orthogroups_2024-Update
Glyma.14G073300 No alias phloem protein 2-B10 0.03 Orthogroups_2024-Update
MA_22084g0010 No alias (at2g02240 : 194.0) maternal effect embryo arrest 66... 0.02 Orthogroups_2024-Update
MA_413510g0010 No alias (at1g09155 : 172.0) phloem protein 2-B15 (PP2-B15);... 0.04 Orthogroups_2024-Update
MA_7604366g0010 No alias (at1g80110 : 163.0) phloem protein 2-B11 (PP2-B11);... 0.04 Orthogroups_2024-Update
PSME_00052353-RA No alias (at2g02230 : 141.0) phloem protein 2-B1 (PP2-B1);... 0.04 Orthogroups_2024-Update
PSME_00053226-RA No alias (at2g02230 : 145.0) phloem protein 2-B1 (PP2-B1);... 0.05 Orthogroups_2024-Update
Potri.013G012600 No alias phloem protein 2-B15 0.02 Orthogroups_2024-Update
Sobic.005G119100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen12g023290 No alias Phloem protein 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 20 159
No external refs found!