PSME_00025237-RA

Description : (at4g20450 : 213.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G29000.1); Has 157406 Blast hits to 121766 proteins in 4522 species: Archae - 95; Bacteria - 13354; Metazoa - 44140; Fungi - 9932; Plants - 71049; Viruses - 392; Other Eukaryotes - 18444 (source: NCBI BLink). & (q8l4h4|nork_medtr : 172.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 414.0) & (original description: no original description)

Gene families : OG_42_0000556 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00025237-RA
Cluster	HCCA clusters: Cluster_144

Target	Alias	Description	ECC score	Gene Family Method
MA_10436790g0010	No alias	(at1g24485 : 95.5) FUNCTIONS IN: molecular_function...	0.04	Orthogroups_2024-Update
MA_151992g0010	No alias	(at5g48740 : 250.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00002794-RA	No alias	(at2g37050 : 509.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00004108-RA	No alias	(at5g48740 : 473.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00004111-RA	No alias	(at5g48740 : 309.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00004374-RA	No alias	(at2g37050 : 408.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00008479-RA	No alias	(at1g67720 : 441.0) Leucine-rich repeat protein kinase...	0.02	Orthogroups_2024-Update
PSME_00010114-RA	No alias	(at1g51860 : 165.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00015669-RA	No alias	(at3g21340 : 439.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00015892-RA	No alias	(at2g14440 : 295.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00020604-RA	No alias	(at2g37050 : 474.0) Leucine-rich repeat protein kinase...	0.06	Orthogroups_2024-Update
PSME_00024204-RA	No alias	(at1g67720 : 441.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00025848-RA	No alias	(at2g28990 : 442.0) Leucine-rich repeat protein kinase...	0.06	Orthogroups_2024-Update
PSME_00027961-RA	No alias	(at1g49100 : 349.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00028208-RA	No alias	(at1g67720 : 248.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00038694-RA	No alias	(at2g19210 : 84.3) Leucine-rich repeat transmembrane...	0.04	Orthogroups_2024-Update
Pp1s13_83V6	No alias	T2N18.19; leucine-rich repeat family protein / protein...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0004568	chitinase activity	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
BP	GO:0006177	GMP biosynthetic process	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
BP	GO:0009163	nucleoside biosynthetic process	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
BP	GO:0017144	drug metabolic process	IEP	Predicted GO
BP	GO:0042278	purine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0042451	purine nucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0046037	GMP metabolic process	IEP	Predicted GO
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0046129	purine ribonucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901070	guanosine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR024788	Malectin-like_Carb-bd_dom	6	329
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	406	562

External Links

No external refs found!

PSME_00025237-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation