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  5. PSME_00025288-RA

PSME_00025288-RA


Description : (at3g54020 : 228.0) Inositol phosphorylceramide synthase; Arabidopsis Inositol phosphorylceramide synthase 1 (AtIPCS1); FUNCTIONS IN: inositol phosphoceramide synthase activity; INVOLVED IN: sphingolipid biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; BEST Arabidopsis thaliana protein match is: Arabidopsis Inositol phosphorylceramide synthase 2 (TAIR:AT2G37940.1); Has 447 Blast hits to 444 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 254; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (reliability: 456.0) & (original description: no original description)


Gene families : OG_42_0001880 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001880_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025288-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_14951 No alias phosphatidylinositol:ceramide inositolphosphotransferase 1 0.02 Orthogroups_2024-Update
Brara.E00723.1 No alias inositol phosphorylceramide synthase *(IPCS) 0.02 Orthogroups_2024-Update
LOC_Os05g21180 No alias phosphatidic acid phosphatase-related, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g37910 No alias phosphatidic acid phosphatase-related, putative, expressed 0.02 Orthogroups_2024-Update
MA_609587g0010 No alias (at3g54020 : 241.0) Inositol phosphorylceramide... 0.04 Orthogroups_2024-Update
PSME_00000205-RA No alias (at3g54020 : 386.0) Inositol phosphorylceramide... 0.01 Orthogroups_2024-Update
PSME_00023172-RA No alias (at2g29525 : 119.0) Inositol phosphorylceramide... 0.02 Orthogroups_2024-Update
PSME_00048192-RA No alias (at2g29525 : 80.9) Inositol phosphorylceramide synthase;... 0.01 Orthogroups_2024-Update
Potri.001G246300 No alias Arabidopsis Inositol phosphorylceramide synthase 1 0.03 Orthogroups_2024-Update
Potri.016G105700 No alias Arabidopsis Inositol phosphorylceramide synthase 1 0.02 Orthogroups_2024-Update
Sobic.008G129000.1 No alias inositol phosphorylceramide synthase *(IPCS) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025749 Sphingomyelin_synth-like_dom 43 111
No external refs found!