PSME_00025360-RA

Description : (at2g44580 : 130.0) zinc ion binding; CONTAINS InterPro DOMAIN/s: Sister chromatid cohesion protein DCC1 (InterPro:IPR019128); Has 214 Blast hits to 211 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 260.0) & (original description: no original description)

Gene families : OG_42_0125519 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00025360-RA
Cluster	HCCA clusters: Cluster_136

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007062	sister chromatid cohesion	None	Extended
BP	GO:0007064	mitotic sister chromatid cohesion	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
CC	GO:0031390	Ctf18 RFC-like complex	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009892	negative regulation of metabolic process	IEP	Predicted GO
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010629	negative regulation of gene expression	IEP	Predicted GO
BP	GO:0016458	gene silencing	IEP	Predicted GO
BP	GO:0031047	gene silencing by RNA	IEP	Predicted GO
BP	GO:0048519	negative regulation of biological process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR019128	Dcc1	2	73

External Links

No external refs found!

PSME_00025360-RA

Expression Profile

Co-expression Networks

Functional Annotation