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  5. Sopen05g033640

Sopen05g033640


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g033640
Cluster HCCA clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g37610 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
MpVg00320.1 No alias No annotation 0.02 Orthogroups_2024-Update
Pp1s249_4V6 No alias No description available 0.02 Orthogroups_2024-Update
Solyc10g054830 No alias No description available 0.02 Orthogroups_2024-Update
Sopen01g027290 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 631 744
IPR013103 RVT_2 1035 1275
IPR025724 GAG-pre-integrase_dom 554 617
No external refs found!