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  5. PSME_00025494-RA

PSME_00025494-RA


Description : (at5g66460 : 437.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 874.0) & (original description: no original description)


Gene families : OG_42_0000309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025494-RA

Target Alias Description ECC score Gene Family Method Actions
234867 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
A4A49_10051 No alias mannan endo-1,4-beta-mannosidase 4 0.01 Orthogroups_2024-Update
LOC_Os03g61270 No alias OsMan04 - Endo-Beta-Mannanase, expressed 0.01 Orthogroups_2024-Update
MA_71720g0010 No alias (at2g20680 : 289.0) Glycosyl hydrolase superfamily... 0.06 Orthogroups_2024-Update
PSME_00033748-RA No alias (at5g66460 : 455.0) Glycosyl hydrolase superfamily... 0.01 Orthogroups_2024-Update
PSME_00039725-RA No alias (at5g66460 : 444.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
PSME_00047131-RA No alias (at5g66460 : 457.0) Glycosyl hydrolase superfamily... 0.01 Orthogroups_2024-Update
Potri.005G229600 No alias Glycosyl hydrolase superfamily protein 0.01 Orthogroups_2024-Update
Potri.007G022000 No alias Glycosyl hydrolase superfamily protein 0.01 Orthogroups_2024-Update
Pp1s180_63V6 No alias hydrolyzing o-glycosyl 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 15 295
No external refs found!