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  5. PSME_00025529-RA

PSME_00025529-RA


Description : (at1g79740 : 126.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 899 Blast hits to 801 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 5; Plants - 875; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025529-RA
Cluster HCCA clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Brara.K01592.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G398024 No alias hAT dimerisation domain-containing protein 0.02 Orthogroups_2024-Update
Glyma.06G236900 No alias hAT dimerisation domain-containing protein / transposase-related 0.03 Orthogroups_2024-Update
Glyma.08G294500 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
MA_109660g0010 No alias (at1g79740 : 120.0) hAT transposon superfamily;... 0.03 Orthogroups_2024-Update
MA_171023g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00003940-RA No alias (at1g79740 : 137.0) hAT transposon superfamily;... 0.05 Orthogroups_2024-Update
PSME_00007555-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00010795-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00019385-RA No alias (at5g33406 : 84.7) hAT dimerisation domain-containing... 0.01 Orthogroups_2024-Update
PSME_00027624-RA No alias (at1g79740 : 142.0) hAT transposon superfamily;... 0.03 Orthogroups_2024-Update
PSME_00031389-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00033581-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00033830-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00038048-RA No alias (at1g79740 : 164.0) hAT transposon superfamily;... 0.03 Orthogroups_2024-Update
PSME_00041319-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00052149-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00055607-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
Solyc10g047710 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!