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  5. PSME_00025581-RA

PSME_00025581-RA


Description : (at2g33570 : 522.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G44670.1); Has 195 Blast hits to 195 proteins in 24 species: Archae - 2; Bacteria - 7; Metazoa - 43; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1044.0) & (original description: no original description)


Gene families : OG_42_0000862 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000862_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025581-RA
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
77156 No alias Domain of unknown function (DUF23) 0.03 Orthogroups_2024-Update
A4A49_22782 No alias galactan beta-1,4-galactosyltransferase gals3 0.03 Orthogroups_2024-Update
A4A49_41718 No alias galactan beta-1,4-galactosyltransferase gals3 0.03 Orthogroups_2024-Update
At4g20170 No alias Galactan beta-1,4-galactosyltransferase GALS3... 0.03 Orthogroups_2024-Update
Glyma.09G047900 No alias Domain of unknown function (DUF23) 0.03 Orthogroups_2024-Update
Glyma.15G155300 No alias Domain of unknown function (DUF23) 0.03 Orthogroups_2024-Update
PSME_00037530-RA No alias (at2g33570 : 517.0) Domain of unknown function (DUF23);... 0.03 Orthogroups_2024-Update
Pp1s237_6V6 No alias F4P9.34; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sopen02g026800 No alias Glycosyltransferase family 92 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 250 476
No external refs found!