1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00025584-RA

PSME_00025584-RA


Description : "(at4g19230 : 145.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; ""cytochrome P450, family 707, subfamily A, polypeptide 1"" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description)"


Gene families : OG_42_0000020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025584-RA
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
120985 No alias cytochrome P450, family 707, subfamily A, polypeptide 4 0.02 Orthogroups_2024-Update
A4A49_27743 No alias abietadienolabietadienal oxidase 0.03 Orthogroups_2024-Update
Brara.C03734.1 No alias abscisic acid hydroxylase & EC_1.14 oxidoreductase... 0.02 Orthogroups_2024-Update
Brara.I01882.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
HORVU5Hr1G009500.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
MA_323670g0010 No alias "(q94iw5|c90d2_orysa : 249.0) Cytochrome P450 90D2 (EC... 0.02 Orthogroups_2024-Update
PSME_00001696-RA No alias "(at3g13730 : 563.0) Encodes a cytochrome P-450 gene... 0.01 Orthogroups_2024-Update
PSME_00019087-RA No alias "(at1g12740 : 353.0) encodes a protein with cytochrome... 0.04 Orthogroups_2024-Update
PSME_00025038-RA No alias (at1g73340 : 355.0) Cytochrome P450 superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00036524-RA No alias "(at5g45340 : 604.0) Encodes a protein with ABA... 0.02 Orthogroups_2024-Update
PSME_00037131-RA No alias (at1g73340 : 344.0) Cytochrome P450 superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00039180-RA No alias (q6f4f5|c724b_orysa : 458.0) Cytochrome P450 724B1 (EC... 0.04 Orthogroups_2024-Update
PSME_00052843-RA No alias "(at5g36110 : 166.0) member of CYP716A; ""cytochrome... 0.04 Orthogroups_2024-Update
Potri.012G115000 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Potri.017G099000 No alias brassinosteroid-6-oxidase 2 0.02 Orthogroups_2024-Update
Potri.018G134000 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Pp1s178_104V6 No alias cytochrome p450 0.02 Orthogroups_2024-Update
Seita.8G093600.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Seita.9G021400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.01 Orthogroups_2024-Update
Sobic.001G022700.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.008G122800.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.009G074300.1 No alias 3-epi-6-deoxocathasterone 23-monooxygenase & EC_1.14... 0.02 Orthogroups_2024-Update
Solyc01g108210 No alias Cytochrome P450 family ABA 8'-hydroxylase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen04g027100 No alias Cytochrome P450 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 118 158
IPR001128 Cyt_P450 3 115
No external refs found!